Unable to perform hbck from datanodes.

snair — Fri, 16 Sep 2022 09:42:06 GMT

Unable to perform hbck from datanodes. The hbck is working from namenode. Hbase version is same in all nodes.

HBase 0.94.15-cdh4.7.1

Command used; # sudo -u hbase hbase hbck

Notr getting any error messages.

Re: Unable to perform hbck from datanodes.

Harsh J — Tue, 29 Sep 2015 08:29:55 GMT

You will need a HBase Gateway role defined on any host you want to run
HBase commands on. Without the local configs, the commands may not function
correctly.

Re: Unable to perform hbck from datanodes.

snair — Tue, 29 Sep 2015 09:16:47 GMT

Here is the slave configuration. How can I add gateway role?. Thanks

======================
root@slave1:/etc/hbase/conf# cat hbase-site.xml
<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="configuration.xsl"?>
<configuration>
<property>
<name>hbase.cluster.distributed</name>
<value>true</value>
</property>
<property>
<name>hbase.rootdir</name>
<value>hdfs://slave1/hbase_cdh471</value>
</property>
<property>
<name>hbase.zookeeper.quorum</name>
<value>zookeeper1,zookeeper2,zookeeper3</value>
</property>
<property>
<name>zookeeper.znode.parent</name>
<value>/hbase_cdh471</value>
</property>
<property>
<name>hbase.regionserver.handler.count</name>
<value>10</value>
</property>
<property>
<name>hbase.hregion.max.filesize</name>
<value>4294967296</value>
</property>
<property>
<name>hbase.regionserver.ipc.address</name>
<value>slave1</value>
</property>
<property>
<name>hbase.regionserver.thread.compaction.small</name>
<value>1</value>
</property>
<property>
<name>hbase.regionserver.thread.compaction.large</name>
<value>1</value>
</property>
</configuration>
================================

Re: Unable to perform hbck from datanodes.

Harsh J — Wed, 30 Sep 2015 15:00:06 GMT

Sorry, I assumed you use Cloudera Manager here. It appears you do have proper local configs in place (from what I understand by 'slave configuration').

Could you try running the command in DEBUG mode to see what its hung on?

export HBASE_ROOT_LOGGER=DEBUG,console
export HADOOP_ROOT_LOGGER=DEBUG,console
sudo -E -u hbase hbase hbck

Are you also certain there's no firewall involved between your cluster hosts, that may otherwise be preventing communication?

Re: Unable to perform hbck from datanodes.

snair — Thu, 01 Oct 2015 10:09:49 GMT

Here is the output. It seems like the port is refusing the connection. There is no firewall restriction. What could be the possible reason ? . Thanks

========

root@ip-xxx.xxx.xxx.yyy:~# sudo -E -u hbase hbase hbck
15/10/01 09:42:06 DEBUG lib.MutableMetricsFactory: field org.apache.hadoop.metrics2.lib.MutableRate org.apache.hadoop.security.UserGroupInformation$UgiMetrics.loginSuccess with annotation @org.apache.hadoop.metrics2.annotation.Metric(valueName=Time, about=, value=[Rate of successful kerberos logins and latency (milliseconds)], always=false, type=DEFAULT, sampleName=Ops)
15/10/01 09:42:06 DEBUG lib.MutableMetricsFactory: field org.apache.hadoop.metrics2.lib.MutableRate org.apache.hadoop.security.UserGroupInformation$UgiMetrics.loginFailure with annotation @org.apache.hadoop.metrics2.annotation.Metric(valueName=Time, about=, value=[Rate of failed kerberos logins and latency (milliseconds)], always=false, type=DEFAULT, sampleName=Ops)
15/10/01 09:42:06 DEBUG lib.MutableMetricsFactory: field org.apache.hadoop.metrics2.lib.MutableRate org.apache.hadoop.security.UserGroupInformation$UgiMetrics.getGroups with annotation @org.apache.hadoop.metrics2.annotation.Metric(valueName=Time, about=, value=[GetGroups], always=false, type=DEFAULT, sampleName=Ops)
15/10/01 09:42:06 DEBUG impl.MetricsSystemImpl: UgiMetrics, User and group related metrics
15/10/01 09:42:06 DEBUG util.KerberosName: Kerberos krb5 configuration not found, setting default realm to empty
15/10/01 09:42:06 DEBUG security.Groups: Creating new Groups object
15/10/01 09:42:06 DEBUG util.NativeCodeLoader: Trying to load the custom-built native-hadoop library...
15/10/01 09:42:06 DEBUG util.NativeCodeLoader: Loaded the native-hadoop library
15/10/01 09:42:06 DEBUG security.JniBasedUnixGroupsMapping: Using JniBasedUnixGroupsMapping for Group resolution
15/10/01 09:42:06 DEBUG security.JniBasedUnixGroupsMappingWithFallback: Group mapping impl=org.apache.hadoop.security.JniBasedUnixGroupsMapping
15/10/01 09:42:06 DEBUG security.Groups: Group mapping impl=org.apache.hadoop.security.JniBasedUnixGroupsMappingWithFallback; cacheTimeout=300000; warningDeltaMs=5000
15/10/01 09:42:06 DEBUG security.UserGroupInformation: hadoop login
15/10/01 09:42:06 DEBUG security.UserGroupInformation: hadoop login commit
15/10/01 09:42:06 DEBUG security.UserGroupInformation: using local user:UnixPrincipal: hbase
15/10/01 09:42:06 DEBUG security.UserGroupInformation: UGI loginUser:hbase (auth:SIMPLE)
15/10/01 09:42:08 DEBUG hdfs.NameNodeProxies: multipleLinearRandomRetry = null
15/10/01 09:42:08 DEBUG ipc.Server: rpcKind=RPC_PROTOCOL_BUFFER, rpcRequestWrapperClass=class org.apache.hadoop.ipc.ProtobufRpcEngine$RpcRequestWritable, rpcInvoker=org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker@43ebf1ca
15/10/01 09:42:10 WARN conf.Configuration: fs.default.name is deprecated. Instead, use fs.defaultFS
15/10/01 09:42:10 DEBUG ipc.Client: The ping interval is 60000 ms.
15/10/01 09:42:10 DEBUG ipc.Client: Use SIMPLE authentication for protocol ClientNamenodeProtocolPB
15/10/01 09:42:10 DEBUG ipc.Client: Connecting to ip-xxx.xxx.xxx.yyy.eu-west-1.compute.internal/xxx.xxx.xxx.yyy:8020
15/10/01 09:42:10 DEBUG ipc.Client: closing ipc connection to ip-xxx.xxx.xxx.yyy.eu-west-1.compute.internal/xxx.xxx.xxx.yyy:8020: Connection refused
java.net.ConnectException: Connection refused
at sun.nio.ch.SocketChannelImpl.checkConnect(Native Method)
at sun.nio.ch.SocketChannelImpl.finishConnect(SocketChannelImpl.java:739)
at org.apache.hadoop.net.SocketIOWithTimeout.connect(SocketIOWithTimeout.java:207)
at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:528)
at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:492)
at org.apache.hadoop.ipc.Client$Connection.setupConnection(Client.java:510)
at org.apache.hadoop.ipc.Client$Connection.setupIOstreams(Client.java:604)
at org.apache.hadoop.ipc.Client$Connection.access$2100(Client.java:252)
at org.apache.hadoop.ipc.Client.getConnection(Client.java:1291)
at org.apache.hadoop.ipc.Client.call(Client.java:1209)
at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:202)
at com.sun.proxy.$Proxy10.getListing(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:164)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:83)
at com.sun.proxy.$Proxy10.getListing(Unknown Source)
at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.getListing(ClientNamenodeProtocolTranslatorPB.java:441)
at org.apache.hadoop.hdfs.DFSClient.listPaths(DFSClient.java:1526)
at org.apache.hadoop.hdfs.DFSClient.listPaths(DFSClient.java:1509)
at org.apache.hadoop.hdfs.DistributedFileSystem.listStatus(DistributedFileSystem.java:406)
at org.apache.hadoop.hbase.util.HBaseFsck.preCheckPermission(HBaseFsck.java:1430)
at org.apache.hadoop.hbase.util.HBaseFsck.exec(HBaseFsck.java:3653)
at org.apache.hadoop.hbase.util.HBaseFsck.run(HBaseFsck.java:3502)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:84)
at org.apache.hadoop.hbase.util.HBaseFsck.main(HBaseFsck.java:3493)
15/10/01 09:42:10 DEBUG ipc.Client: IPC Client (1163306898) connection to ip-xxx.xxx.xxx.yyy.eu-west-1.compute.internal/xxx.xxx.xxx.yyy:8020 from hbase: closed
15/10/01 09:42:10 DEBUG ipc.Client: Stopping client

========

Re: Unable to perform hbck from datanodes.

Harsh J — Thu, 01 Oct 2015 10:19:55 GMT

Unless your NameNode is down, the only other reason, minus firewalls/etc.
misconfigs, is that the NameNode port (and maybe other services' ports) are
listening on a different network interfaces than the internal IP one. You
could verify this with netstat on the refusing service's host.

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Unable to perform hbck from datanodes.

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Re: Unable to perform hbck from datanodes.