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Okay, I finally got this working by setting up a File System Initial Context for the IBM MQ queue.

 

tier1.sources.source2.type = jms
tier1.sources.source2.providerURL = file:///home/cloudera/JNDI-Directory
tier1.sources.source2.initialContextFactory = com.sun.jndi.fscontext.RefFSContextFactory
tier1.sources.source2.destinationType = QUEUE
tier1.sources.source2.destinationName = theQueueName

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