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05-03-2017
10:01 PM
Problem: There's a known bug in Ambari 2.4 and 2.5 that causes "ambari-server upgrade" to fail if the agent RPM is not upgraded first. E.g. stack trace: Using python /usr/bin/python Setup ambari-server Traceback (most recent call last): File "/usr/sbin/ambari-server.py", line 33, in from ambari_server.dbConfiguration import DATABASE_NAMES, LINUX_DBMS_KEYS_LIST File "/usr/lib/python2.6/site-packages/ambari_server/dbConfiguration.py", line 28, in from ambari_server.serverConfiguration import decrypt_password_for_alias, get_ambari_properties, get_is_secure, \ File "/usr/lib/python2.6/site-packages/ambari_server/serverConfiguration.py", line 36, in from ambari_commons.os_utils import run_os_command, search_file, set_file_permissions, parse_log4j_file ImportError: cannot import name parse_log4j_file Cause: This occurs because os_utils.py and other python files inside of /usr/lib/ambari-agent/lib/ambari_commons are upgraded by the agent's RPM and are used by the server's scripts to find which database to use.
Solution:
Note: Always back up your Ambari database before the upgrade. If ambari-agent is also present on the Ambari Server host, run "yum upgrade ambari-agent" (or equivalent for your OS).
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01-31-2017
01:47 AM
10 Kudos
Whether you're creating an Ambari cluster from scratch, taking over an existing cluster, or growing your cluster over time, it is imperative to tune Ambari and MySQL to work at a large scale of 1000-3000 Ambari Agents. Ambari Server Configs
First, increase the memory used by Ambari. For large clusters, 8 GB of memory should be sufficient. If you have more than 10 concurrent users, increase it to 16 GB.
Edit /var/lib/ambari-server/ambari-env.sh and change the -Xmn setting.
export AMBARI_JVM_ARGS=$AMBARI_JVM_ARGS' -Xms2048m -Xmx8192m
Edit /etc/ambari-server/conf/ambari.properties with the following configs
# The size of the Jetty connection pool used for handling incoming Ambari Agent requests.
# 10 hosts => 25
# 50 hosts => 35
# 100 hosts => 75
# 500 hosts => 100
agent.threadpool.size.max=100
# Determines whether current alerts should be cached.
# Enabling this can increase performance on large cluster, but can also result in lost alert data
# if the cache is not flushed frequently.
alerts.cache.enabled=true
# The size of the alert cache.
# Less than 50 hosts => 50000
# More than 50 hosts => 100000
alerts.cache.size=100000
# The number of threads used to handle alerts received from the Ambari Agents.
# The value should be increased as the size of the cluster increases.
# Less than 50 hosts => 2
# More than 50 hosts => 4
alerts.execution.scheduler.maxThreads=4
After performing these changes, restart Ambari Server. Move an existing Ambari DB from a spinning disk to a SSD
It is highly suggested to use a Solid State Drive for the Ambari Database since this will be much faster.
Check the throughput of the disk in which Ambari’s database (Postgres, MySQL, MariaDB, or Oracle) is on.Ideally, it should be a Solid State Drive or support at least 200 IOPS and be either on the same host as Ambari or only a 1-2 hops away.
Type
Details
IOPS
Throughput
HDD
10,000 rpm SAS drive
175-210
100 MB/s
SSD
solid-state
500+
500+ MB/s
1. ambari-server stop
2. Take a backup of the Ambari database,
mysqldump -u root ambari > /tmp/ambari.sql
3. Stop MySQL server, copy its data, and change the directory.
service mysqld stop
cp -R -p /var/lib/mysql /mnt/disks/ssd/mysql
cat /etc/my.cnf
sed -ie 's/\/var\/lib\/mysql/\/mnt\/disks\/ssd\/mysql/g' /etc/my.cnf
4. Create symlink for sock file and start MySQL
ln -s /mnt/disks/ssd/mysql/mysql.sock /var/lib/mysql/mysql.sock
service mysqldstart
5. Ensure Ambari DB is accessible.
mysql -u root -p
show databases;
use ambari;
show tables;
select count(*) from hosts;
MySQL Optimizations
First and foremost, if you're on an older version of MySQL, you can try to update it to MySQL 5.6 or 5.7, which has a lot of performance improvements.
Connect to the MySQL DB and inspect these variables. E.g.,
SHOW VARIABLES LIKE 'name';These suggested values assume that only Ambari Database’s is on the MySQL Server.If you have other databases in the same MySQL Server, increment by these values.
WARNING: Never stop MySQL server while Ambari Server is running.
Variable
Suggested Value
innodb_log_buffer_size
512M
innodb_buffer_pool_size
16G
innodb_file_io_threads (deprecated in MySQL 5.5)
16
innodb_log_file_size
5M
innodb_thread_concurrency
32
join_buffer_size
512M
key_buffer_size
16G
max_connections
500
max_allowed_packet
1024M
max_heap_table_size
64M
query_cache_limit
16M
query_cache_size
512M
read_rnd_buffer_size
128M
sort_buffer_size
128M
table_open_cache
1024
thread_cache_size
128
thread_stack
256K
To change these values.1. Stop MySQL: service mysqld stop
2. Edit the configs in /etc/my.cnf , under the “[mysqld]” section (note, it may be in a different location).
3. Start MySQL: service mysqld start
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04-25-2016
11:40 PM
7 Kudos
When performing a
Rolling or Express Upgrade, failures can naturally happen because large clusters are bound to have problematic hosts.
Here are 10 easy tips to prevent, diagnose and fix errors. Before upgrading the stack ...
1. Always upgrade Ambari to the most recent version, even if it's a dot release.
Often, there are fixes and optimizations that make the stack upgrade smoother.
2. Ensure all services are up, service checks are passing, there are no critical alerts, etc.
This helps ensure that the cluster is fully operational and helps to isolate any failures.
3. Pre-Install the bits and make sure all hosts have enough disk space. You can check that the version is found on all hosts. E.g.,
hdp-select versions | grep 2.5.0.0 | sort | tail -1
4. Do not ignore warnings. Starting in Ambari 2.2.2, there's a flag in ambari.properties file that allows users to bypass PreCheck errors, make sure it is either not present or set to false,
stack.upgrade.bypass.prechecks=false
5. Take a backup of the Ambari database. E.g.,
pg_dump -U ambari ambari > /tmp/ambari_bk.psql
mysqldump -u ambari ambari > /tmp/ambari_bk.mysql
In the middle of Upgrade ...
6. Rolling Upgrade will pause after 30% of the DataNodes have been upgraded. This allows the customer to run additional jobs and ensure that the partial upgrade is still healthy.
7. If a failure occurs, click on "Retry" and make sure that all other dependent services and masters are up.
Often, a retry will work if the previous command failed due to a timeout, network glitch, host goes down and then comes back up, etc. Capture any logs from both the component that failed and the ambari-agent at /var/lib/ambari-agent/data/output-*.txt and /var/lib/ambari-agent/data/errors-*.txt
8. If the failure requires changing configs or restarting a component on a host, then click on the "Pause" button. This will temporarily suspend the Upgrade/Downgrade and allow the user to change configs, execute other commands, such as restarting services, running service checks, etc. Once done, click on the "Resume" button.
CAUTION: do not ever add or move hosts, add or delete services, enable High Availability, or change topology while the upgrade is in progress.
If cannot Finalize ...
9. Find out the problematic hosts and components. In Ambari 2.0 - 2.2, you can run
SELECT repo_version_id, version, display_name FROM repo_version;
-- The state for your version may be in UPGRADING, UPGRADED.-- UPGRADING: some component on a host is still not on the newer version
-- UPGRADED: all components on all hosts are on the newer version
SELECT version, state FROM cluster_version cv JOIN repo_version rv ON cv.repo_version_id = rv.repo_version_id ORDER BY version DESC;
-- Find how many hosts are in each state
SELECT version, state, COUNT(*) FROM host_version hv JOIN repo_version rv ON hv.repo_version_id = rv.repo_version_id GROUP BY version, state ORDER BY version DESC, state;
-- Find components on hosts still not on the newer version
SELECT service_name, component_name, version, host_name FROM hostcomponentstate hcs JOIN hosts h ON hcs.host_id = h.host_id WHERE service_name NOT IN ('AMBARI_METRICS', 'KERBEROS') and component_name NOT IN ('ZKFC') ORDER BY version, service_name, component_name, host_name;
On these hosts, run the following,
1. hdp-select set all <new_version>
2. Restart any components still on the older version (you may have to click on the "Pause" button first).
Once all hosts are on the newer version, then the Cluster Version status should transition to UPGRADED; this will allow you to Finalize the upgrade.
10. If you still run into problems, gather all of the logs, result of the SQL queries, and either email Hortonworks Support or the mailing list of the component it failed on.
Here's another useful query.
Postgres:
SELECT u.upgrade_id, u.direction, u.from_version, u.to_version, hrc.request_id, hrc.task_id, substr(g.group_title, 0, 30), substr(i.item_text, 0, 30), hrc.status
FROM upgrade_group g JOIN upgrade u ON g.upgrade_id = u.upgrade_id
JOIN upgrade_item i ON i.upgrade_group_id = g.upgrade_group_id
JOIN host_role_command hrc ON hrc.stage_id = i.stage_id AND hrc.request_id = u.request_id
ORDER BY hrc.task_id;
MySQL:
SELECT u.upgrade_id, u.direction, u.from_version, u.to_version, hrc.request_id, hrc.task_id, left(g.group_title, 30), left(i.item_text, 30), hrc.status
FROM upgrade_group g JOIN upgrade u ON g.upgrade_id = u.upgrade_id
JOIN upgrade_item i ON i.upgrade_group_id = g.upgrade_group_id
JOIN host_role_command hrc ON hrc.stage_id = i.stage_id AND hrc.request_id = u.request_id
ORDER BY hrc.task_id;
Have fun upgrading.
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09-05-2017
07:27 PM
We use HDFS on Isilon OneFS and the upgrade would normally get stuck on upgrade check on the Isilon node. In order to allow the upgrade to proceed, we have to disable the preUpgradeCheck. Hoping Ambari will eventually have a better documented upgrade guide for those who use Isilon HDFS.
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09-12-2016
05:23 AM
Great article @Alejandro Fernandez Have added more details about the pre-checks here - https://community.hortonworks.com/articles/54944/stack-upgrade-pre-checks-purpose-and-remediation.html
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